Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | EHT25_01040 | Not Available | Negative | 221629 - 222930 | 48730.2 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EHT25_01045 | Not Available | Negative | 222953 - 224377 | 53880.4 |
| outer membrane protein assembly factor | EHT25_01050 | Not Available | Negative | 224593 - 227235 | 100645.0 |
| rna methyltransferase | EHT25_01055 | Not Available | Positive | 227255 - 228019 | 28256.9 |
| hypothetical protein | EHT25_01060 | Not Available | Positive | 228200 - 231430 | 121781.0 |
| dna-binding response regulator | EHT25_01065 | Not Available | Positive | 231554 - 232204 | 24288.7 |
| susc/raga family tonb-linked outer membrane protein | EHT25_01070 | Not Available | Positive | 232493 - 235693 | 116071.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_01075 | Not Available | Positive | 235717 - 237258 | 56101.3 |
| hypothetical protein | EHT25_01080 | Not Available | Positive | 237490 - 237933 | 16646.3 |
| nuclear transport factor 2 family protein | EHT25_01085 | Not Available | Negative | 238051 - 238923 | 31907.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
