Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | EHT25_10900 | Not Available | Negative | 2723036 - 2723560 | 19466.2 |
| t9ss c-terminal target domain-containing protein | EHT25_10905 | Not Available | Negative | 2723642 - 2726257 | 95575.3 |
| hypothetical protein | EHT25_10910 | Not Available | Negative | 2726295 - 2727308 | 37151.2 |
| transcriptional regulator | EHT25_10915 | Not Available | Negative | 2727511 - 2728596 | 40361.3 |
| lactonase family protein | EHT25_10920 | Not Available | Negative | 2728593 - 2729720 | 40275.9 |
| polyisoprenoid-binding protein | EHT25_10925 | Not Available | Negative | 2729880 - 2730449 | 20712.6 |
| s9 family peptidase | EHT25_10930 | Not Available | Positive | 2730715 - 2732772 | 76800.7 |
| duf2281 domain-containing protein | EHT25_10935 | Not Available | Positive | 2732845 - 2733060 | 8092.59 |
| type ii toxin-antitoxin system vapc family toxin | EHT25_10940 | Not Available | Positive | 2733060 - 2733455 | 14962.2 |
| alpha/beta hydrolase | EHT25_10945 | Not Available | Positive | 2733500 - 2734402 | 32691.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
