Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | EHT25_10800 | Not Available | Positive | 2700414 - 2701766 | 51347.7 |
| response regulator | EHT25_10805 | Not Available | Positive | 2701827 - 2702201 | 13861.9 |
| adenylate/guanylate cyclase domain-containing response regulator | EHT25_10810 | Not Available | Positive | 2702198 - 2703244 | 39244.5 |
| tetr/acrr family transcriptional regulator | EHT25_10815 | Not Available | Positive | 2703395 - 2704012 | 24174.4 |
| tolc family protein | EHT25_10820 | Not Available | Positive | 2704054 - 2705439 | 51770.8 |
| efflux rnd transporter periplasmic adaptor subunit | EHT25_10825 | Not Available | Positive | 2705491 - 2706552 | 38113.6 |
| efflux rnd transporter permease subunit | EHT25_10830 | Not Available | Positive | 2706666 - 2709743 | 112366.0 |
| crp/fnr family transcriptional regulator | EHT25_10835 | Not Available | Negative | 2710170 - 2710769 | 23496.7 |
| duf2141 domain-containing protein | EHT25_10840 | Not Available | Positive | 2711006 - 2711416 | 14944.2 |
| imp dehydrogenase | EHT25_10845 | Not Available | Positive | 2711473 - 2712945 | 52728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
