Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_10700 | Not Available | Positive | 2672299 - 2673021 | 26514.7 |
| ycei family protein | EHT25_10705 | Not Available | Positive | 2673023 - 2673583 | 20757.1 |
| type iii polyketide synthase | EHT25_10710 | Not Available | Positive | 2673598 - 2674800 | 44544.8 |
| peptide-methionine (r)-s-oxide reductase | EHT25_10715 | Not Available | Positive | 2674822 - 2675337 | 19039.7 |
| peptide-methionine (s)-s-oxide reductase | EHT25_10720 | Not Available | Positive | 2675351 - 2676007 | 24155.6 |
| hypothetical protein | EHT25_10725 | Not Available | Negative | 2676382 - 2679084 | 101852.0 |
| hypothetical protein | EHT25_10730 | Not Available | Positive | 2679609 - 2682893 | 122308.0 |
| alpha-l-rhamnosidase | EHT25_10735 | Not Available | Positive | 2682890 - 2685619 | 101310.0 |
| sdr family oxidoreductase | EHT25_10740 | Not Available | Positive | 2685639 - 2686385 | 26524.5 |
| cyclase family protein | EHT25_10745 | Not Available | Positive | 2686390 - 2687013 | 23904.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
