Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | EHT25_10490 | Not Available | Positive | 2609095 - 2609865 | 28415.3 |
| mfs transporter | EHT25_10495 | Not Available | Negative | 2609929 - 2611098 | 40703.0 |
| phytanoyl-coa dioxygenase | EHT25_10500 | Not Available | Positive | 2611466 - 2612254 | 29165.7 |
| hypothetical protein | EHT25_10505 | Not Available | Positive | 2612321 - 2612650 | 11612.0 |
| cusa/czca family heavy metal efflux rnd transporter | EHT25_10510 | Not Available | Positive | 2612750 - 2617159 | 161289.0 |
| efflux rnd transporter periplasmic adaptor subunit | EHT25_10515 | Not Available | Positive | 2617156 - 2618394 | 45164.8 |
| hypothetical protein | EHT25_10520 | Not Available | Positive | 2618406 - 2619026 | 22431.0 |
| cadmium-translocating p-type atpase | EHT25_10525 | Not Available | Positive | 2619032 - 2621017 | 71014.4 |
| bacteriocin-protection protein | EHT25_10530 | Not Available | Positive | 2621366 - 2621941 | 21929.1 |
| fad-dependent oxidoreductase | EHT25_10540 | Not Available | Negative | 2622463 - 2623899 | 54325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
