Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4976 domain-containing protein | EHT25_09940 | Not Available | Positive | 2467924 - 2469486 | 59848.4 |
| formylglycine-generating enzyme family protein | EHT25_09945 | Not Available | Positive | 2469452 - 2470582 | 41280.2 |
| arylsulfatase | EHT25_09950 | Not Available | Positive | 2470597 - 2472042 | 52821.9 |
| cytochrome c | EHT25_09955 | Not Available | Negative | 2472089 - 2472496 | 15022.4 |
| transcriptional regulator | EHT25_09960 | Not Available | Negative | 2472513 - 2472860 | 12645.4 |
| efflux rnd transporter periplasmic adaptor subunit | EHT25_09965 | Not Available | Positive | 2473064 - 2474158 | 39535.7 |
| efflux rnd transporter permease subunit | EHT25_09970 | Not Available | Positive | 2474303 - 2477371 | 112208.0 |
| tolc family protein | EHT25_09975 | Not Available | Positive | 2477485 - 2478822 | 49320.4 |
| alpha/beta hydrolase | EHT25_09980 | Not Available | Positive | 2479033 - 2479998 | 36849.1 |
| dna-binding response regulator | EHT25_09985 | Not Available | Negative | 2480429 - 2481211 | 29755.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
