Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase | EHT25_09740 | Not Available | Positive | 2422435 - 2423316 | 33596.3 |
| sdr family oxidoreductase | EHT25_09745 | Not Available | Positive | 2423344 - 2424129 | 28866.8 |
| duf5009 domain-containing protein | EHT25_09750 | Not Available | Negative | 2424210 - 2425355 | 43458.6 |
| dna-formamidopyrimidine glycosylase | EHT25_09755 | Not Available | Negative | 2425509 - 2426363 | 32618.1 |
| hypothetical protein | EHT25_09760 | Not Available | Positive | 2426658 - 2427596 | 34552.1 |
| hypothetical protein | EHT25_09765 | Not Available | Negative | 2427672 - 2428028 | 13960.0 |
| lyttr family transcriptional regulator | EHT25_09770 | Not Available | Negative | 2428114 - 2428491 | 14180.0 |
| dna-binding response regulator | EHT25_09775 | Not Available | Positive | 2428702 - 2429484 | 29585.9 |
| hypothetical protein | EHT25_09780 | Not Available | Positive | 2429523 - 2431379 | 71769.5 |
| duf3078 domain-containing protein | EHT25_09785 | Not Available | Negative | 2431405 - 2432301 | 33567.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
