Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator | EHT25_09640 | Not Available | Positive | 2393751 - 2394650 | 34344.9 |
| duf2306 domain-containing protein | EHT25_09645 | Not Available | Positive | 2394801 - 2395499 | 26064.9 |
| hypothetical protein | EHT25_09650 | Not Available | Negative | 2395567 - 2396340 | 28986.4 |
| dead/deah box helicase | EHT25_09655 | Not Available | Negative | 2396411 - 2397808 | 52208.6 |
| ketosamine-3-kinase | EHT25_09660 | Not Available | Negative | 2397938 - 2398819 | 33660.0 |
| anhydro-n-acetylmuramic acid kinase | EHT25_09665 | Not Available | Positive | 2398900 - 2400099 | 43591.9 |
| l-2-hydroxyglutarate oxidase | EHT25_09670 | Not Available | Positive | 2400104 - 2401300 | 44294.4 |
| hypothetical protein | EHT25_09675 | Not Available | Positive | 2401434 - 2402273 | 31047.3 |
| aldose 1-epimerase family protein | EHT25_09680 | Not Available | Negative | 2402360 - 2403226 | 32932.0 |
| mfs transporter | EHT25_09685 | Not Available | Positive | 2403299 - 2404549 | 44699.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
