Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | EHT25_09440 | Not Available | Negative | 2342882 - 2344390 | 55530.8 |
| s9 family peptidase | EHT25_09445 | Not Available | Positive | 2344550 - 2346622 | 78951.3 |
| m23 family metallopeptidase | EHT25_09450 | Not Available | Positive | 2346727 - 2347557 | 30873.1 |
| hypothetical protein | EHT25_09455 | Not Available | Negative | 2347642 - 2349687 | 76301.3 |
| carbohydrate kinase | EHT25_09460 | Not Available | Positive | 2349852 - 2351330 | 53206.4 |
| laci family transcriptional regulator | EHT25_09465 | Not Available | Negative | 2351356 - 2352366 | 37827.8 |
| gfo/idh/moca family oxidoreductase | EHT25_09470 | Not Available | Positive | 2352596 - 2353966 | 50410.0 |
| susc/raga family tonb-linked outer membrane protein | EHT25_09475 | Not Available | Positive | 2354104 - 2357031 | 107025.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_09480 | Not Available | Positive | 2357044 - 2358495 | 53564.6 |
| duf3472 domain-containing protein | EHT25_09485 | Not Available | Positive | 2358506 - 2359801 | 48163.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
