Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | EHT25_09290 | Not Available | Positive | 2307064 - 2307837 | 28949.4 |
| rhomboid family intramembrane serine protease | EHT25_09295 | Not Available | Positive | 2307841 - 2308761 | 34249.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EHT25_09300 | Not Available | Positive | 2309046 - 2310980 | 71128.6 |
| aspartate kinase | EHT25_09305 | Not Available | Positive | 2311127 - 2312404 | 48388.6 |
| carboxylesterase family protein | EHT25_09310 | Not Available | Negative | 2312494 - 2314128 | 58635.9 |
| alpha/beta hydrolase | EHT25_09315 | Not Available | Positive | 2314285 - 2315343 | 40553.7 |
| leucyl aminopeptidase family protein | EHT25_09320 | Not Available | Positive | 2315373 - 2316836 | 53335.2 |
| atpase | EHT25_09325 | Not Available | Positive | 2316954 - 2318168 | 46119.5 |
| dna mismatch repair protein muts | EHT25_09330 | Not Available | Negative | 2318165 - 2319973 | 67875.6 |
| transcriptional repressor | EHT25_09335 | Not Available | Negative | 2319973 - 2320404 | 16269.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
