Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis protein cutc | EHT25_09240 | Not Available | Negative | 2295965 - 2296705 | 25988.5 |
| duf2795 domain-containing protein | EHT25_09245 | Not Available | Positive | 2296902 - 2297123 | 8686.74 |
| beta-carotene hydroxylase | EHT25_09250 | Not Available | Negative | 2297204 - 2297647 | 17568.8 |
| atp-binding protein | EHT25_09255 | Not Available | Positive | 2297851 - 2298495 | 24590.6 |
| hypothetical protein | EHT25_09260 | Not Available | Positive | 2298740 - 2300494 | 66859.0 |
| duf4292 domain-containing protein | EHT25_09265 | Not Available | Positive | 2300487 - 2301338 | 32106.8 |
| peptidase m23 | EHT25_09270 | Not Available | Positive | 2301357 - 2302790 | 54492.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EHT25_09275 | Not Available | Positive | 2302924 - 2303742 | 29677.0 |
| rna pseudouridine synthase | EHT25_09280 | Not Available | Positive | 2303823 - 2304548 | 28047.0 |
| dna mismatch repair endonuclease mutl | EHT25_09285 | Not Available | Positive | 2305087 - 2307027 | 72029.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
