Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | EHT25_09140 | Not Available | Negative | 2268411 - 2269412 | 36175.9 |
| sigma-70 family rna polymerase sigma factor | EHT25_09145 | Not Available | Positive | 2269792 - 2270403 | 24269.0 |
| fecr family protein | EHT25_09150 | Not Available | Positive | 2270400 - 2271488 | 41317.3 |
| susc/raga family tonb-linked outer membrane protein | EHT25_09155 | Not Available | Positive | 2271667 - 2275134 | 128045.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_09160 | Not Available | Positive | 2275161 - 2276669 | 56595.4 |
| duf1080 domain-containing protein | EHT25_09165 | Not Available | Positive | 2276674 - 2277390 | 26082.3 |
| gfo/idh/moca family oxidoreductase | EHT25_09170 | Not Available | Positive | 2277400 - 2278749 | 49900.2 |
| duf2520 domain-containing protein | EHT25_09175 | Not Available | Positive | 2279060 - 2279854 | 29413.3 |
| n-acyl-d-glucosamine 2-epimerase | EHT25_09180 | Not Available | Negative | 2279861 - 2281087 | 46998.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | EHT25_09185 | Not Available | Positive | 2281170 - 2281724 | 20630.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
