Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf11 domain-containing protein | EHT25_00840 | Not Available | Positive | 166698 - 169440 | 93099.8 |
| hypothetical protein | EHT25_00845 | Not Available | Positive | 169558 - 177759 | 279837.0 |
| type ix secretion system membrane protein porp/sprf | EHT25_00850 | Not Available | Positive | 177764 - 178753 | 36611.3 |
| flagellar motor protein motb | EHT25_00855 | Not Available | Positive | 178905 - 181268 | 88118.9 |
| type ix secretion system membrane protein porp/sprf | EHT25_00860 | Not Available | Positive | 181308 - 182228 | 33772.8 |
| glycosyltransferase family 2 protein | EHT25_00865 | Not Available | Positive | 182335 - 183207 | 34164.6 |
| low affinity iron permease family protein | EHT25_00870 | Not Available | Negative | 183213 - 183692 | 18207.1 |
| abc transporter atp-binding protein | EHT25_00875 | Not Available | Positive | 183813 - 185675 | 69293.5 |
| uma2 family endonuclease | EHT25_00880 | Not Available | Negative | 185677 - 186288 | 23205.1 |
| chromate efflux transporter | EHT25_00885 | Not Available | Negative | 186361 - 187572 | 44178.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
