Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | EHT25_08530 | Not Available | Negative | 2116890 - 2118596 | 63218.5 |
| esterase | EHT25_08535 | Not Available | Negative | 2118619 - 2119341 | 26907.5 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_08540 | Not Available | Negative | 2119603 - 2121024 | 52927.4 |
| tonb-dependent receptor | EHT25_08545 | Not Available | Negative | 2121144 - 2124623 | 125182.0 |
| duf4974 domain-containing protein | EHT25_08550 | Not Available | Negative | 2124620 - 2125639 | 38405.9 |
| rna polymerase sigma-70 factor | EHT25_08555 | Not Available | Negative | 2125664 - 2126338 | 26212.4 |
| dehydrogenase | EHT25_08560 | Not Available | Positive | 2127082 - 2129946 | 106838.0 |
| vcbs repeat-containing protein | EHT25_08565 | Not Available | Positive | 2130057 - 2131316 | 46556.9 |
| lrp/asnc family transcriptional regulator | EHT25_08570 | Not Available | Negative | 2131446 - 2131556 | 4045.87 |
| hypothetical protein | EHT25_08575 | Not Available | Positive | 2131999 - 2132187 | 6635.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
