Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | EHT25_08080 | Not Available | Positive | 1993837 - 1994217 | 13661.8 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | EHT25_08085 | Not Available | Negative | 1994375 - 1995193 | 30215.3 |
| gwxtd domain-containing protein | EHT25_08090 | Not Available | Negative | 1995166 - 1996515 | 50864.5 |
| class i sam-dependent methyltransferase | EHT25_08095 | Not Available | Positive | 1996715 - 1997482 | 29563.4 |
| sdr family oxidoreductase | EHT25_08100 | Not Available | Negative | 1997552 - 1998421 | 31114.6 |
| aminotransferase class v-fold plp-dependent enzyme | EHT25_08105 | Not Available | Positive | 1998571 - 1999704 | 40890.8 |
| sdr family oxidoreductase | EHT25_08110 | Not Available | Negative | 1999701 - 2000561 | 31667.2 |
| hypothetical protein | EHT25_08115 | Not Available | Positive | 2001634 - 2001894 | 9729.94 |
| hypothetical protein | EHT25_08120 | Not Available | Positive | 2002186 - 2004399 | 84706.7 |
| hypothetical protein | EHT25_08125 | Not Available | Positive | 2004405 - 2005571 | 43961.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
