Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EHT25_08030 | Not Available | Negative | 1978990 - 1982313 | 120285.0 |
| glucose 1-dehydrogenase | EHT25_08035 | Not Available | Negative | 1982612 - 1983385 | 26781.3 |
| altronate dehydratase | EHT25_08040 | Not Available | Negative | 1983483 - 1985150 | 60712.7 |
| adenine deaminase | EHT25_08045 | Not Available | Positive | 1985273 - 1986922 | 59499.7 |
| sigma-70 family rna polymerase sigma factor | EHT25_08050 | Not Available | Positive | 1987084 - 1987674 | 23143.6 |
| replication-associated recombination protein a | EHT25_08055 | Not Available | Positive | 1987789 - 1989060 | 47102.7 |
| hypothetical protein | EHT25_08060 | Not Available | Negative | 1989061 - 1989444 | 15106.0 |
| hypothetical protein | EHT25_08065 | Not Available | Negative | 1989569 - 1990741 | 44192.1 |
| duf2157 domain-containing protein | EHT25_08070 | Not Available | Negative | 1990811 - 1991782 | 36731.4 |
| vrr-nuc domain-containing protein | EHT25_08075 | Not Available | Positive | 1991916 - 1993607 | 66286.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
