Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | EHT25_00740 | Not Available | Negative | 140948 - 141382 | 15866.9 |
| hypothetical protein | EHT25_00745 | Not Available | Negative | 141564 - 143729 | 81871.8 |
| glucosidase | EHT25_00750 | Not Available | Negative | 144021 - 146696 | 104079.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_00755 | Not Available | Negative | 147097 - 148416 | 46540.4 |
| susc/raga family tonb-linked outer membrane protein | EHT25_00760 | Not Available | Negative | 148474 - 151635 | 114178.0 |
| hypothetical protein | EHT25_00765 | Not Available | Negative | 151934 - 152179 | 9687.46 |
| faa hydrolase family protein | EHT25_00770 | Not Available | Positive | 152319 - 153173 | 30794.7 |
| amidohydrolase | EHT25_00775 | Not Available | Positive | 153259 - 154083 | 32077.1 |
| sdr family oxidoreductase | EHT25_00780 | Not Available | Positive | 154179 - 154961 | 28052.5 |
| l-fucose:h+ symporter permease | EHT25_00785 | Not Available | Positive | 155041 - 156315 | 46350.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
