Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EHT25_07830 | Not Available | Negative | 1924206 - 1925456 | 45980.8 |
| hypothetical protein | EHT25_07835 | Not Available | Positive | 1925662 - 1926780 | 42833.6 |
| duf86 domain-containing protein | EHT25_07840 | Not Available | Negative | 1926763 - 1926924 | 6233.74 |
| hypothetical protein | EHT25_07845 | Not Available | Negative | 1926894 - 1927100 | 7731.46 |
| nucleotidyltransferase domain-containing protein | EHT25_07850 | Not Available | Negative | 1927093 - 1927401 | 11882.2 |
| dna mismatch repair protein muts | EHT25_07855 | Not Available | Negative | 1927421 - 1930105 | 100225.0 |
| hypothetical protein | EHT25_07860 | Not Available | Positive | 1930249 - 1931283 | 39150.9 |
| trmh family rna methyltransferase | EHT25_07865 | Not Available | Positive | 1931317 - 1931859 | 19788.6 |
| hypothetical protein | EHT25_07870 | Not Available | Negative | 1932143 - 1932331 | 5854.12 |
| sensor histidine kinase | EHT25_07875 | Not Available | Positive | 1932818 - 1934116 | 49053.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
