Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EHT25_07470 | Not Available | Positive | 1837705 - 1839453 | 65902.8 |
| hypothetical protein | EHT25_07475 | Not Available | Positive | 1840095 - 1844681 | 155835.0 |
| peptidase domain-containing abc transporter | EHT25_07480 | Not Available | Positive | 1845494 - 1847692 | 82045.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | EHT25_07485 | Not Available | Positive | 1847622 - 1849013 | 53564.6 |
| hypothetical protein | EHT25_07490 | Not Available | Negative | 1849024 - 1850166 | 42811.3 |
| hypothetical protein | EHT25_07495 | Not Available | Negative | 1850229 - 1850495 | 10297.7 |
| hypothetical protein | EHT25_07500 | Not Available | Negative | 1850557 - 1850745 | 7164.65 |
| sugar phosphate isomerase/epimerase | EHT25_07505 | Not Available | Positive | 1851085 - 1852128 | 38281.0 |
| hypothetical protein | EHT25_07510 | Not Available | Negative | 1852158 - 1853441 | 47588.6 |
| degt/dnrj/eryc1/strs family aminotransferase | EHT25_07515 | Not Available | Positive | 1853571 - 1854800 | 45236.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
