Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | EHT25_07420 | Not Available | Positive | 1820351 - 1821157 | 29817.1 |
| hypothetical protein | EHT25_07425 | Not Available | Positive | 1821410 - 1823203 | 69351.1 |
| dna-binding response regulator | EHT25_07430 | Not Available | Positive | 1823209 - 1823949 | 28222.3 |
| gnat family n-acetyltransferase | EHT25_07435 | Not Available | Positive | 1823960 - 1824421 | 17246.2 |
| sensor histidine kinase | EHT25_07440 | Not Available | Negative | 1824427 - 1825707 | 47931.2 |
| helix-turn-helix domain-containing protein | EHT25_07445 | Not Available | Positive | 1826334 - 1828259 | 72293.2 |
| helix-turn-helix domain-containing protein | EHT25_07450 | Not Available | Positive | 1828399 - 1830333 | 72504.5 |
| hypothetical protein | EHT25_07455 | Not Available | Positive | 1830423 - 1830968 | 20266.6 |
| hypothetical protein | EHT25_07460 | Not Available | Positive | 1830987 - 1835786 | 164685.0 |
| rna polymerase sigma factor | EHT25_07465 | Not Available | Negative | 1835874 - 1837325 | 54364.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
