Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase family protein | EHT25_07370 | Not Available | Positive | 1801585 - 1802979 | 52911.1 |
| sigma-70 family rna polymerase sigma factor | EHT25_07375 | Not Available | Positive | 1803161 - 1803700 | 21266.0 |
| fecr family protein | EHT25_07380 | Not Available | Positive | 1803882 - 1804922 | 39394.6 |
| susc/raga family tonb-linked outer membrane protein | EHT25_07385 | Not Available | Positive | 1805049 - 1808726 | 134278.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_07390 | Not Available | Positive | 1808748 - 1810388 | 59869.1 |
| susc/raga family tonb-linked outer membrane protein | EHT25_07395 | Not Available | Positive | 1810604 - 1814014 | 124528.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_07400 | Not Available | Positive | 1814028 - 1815668 | 59807.8 |
| hypothetical protein | EHT25_07405 | Not Available | Positive | 1815788 - 1817038 | 45077.9 |
| phopq-activated pathogenicity-like protein pqaa type | EHT25_07410 | Not Available | Positive | 1817106 - 1818482 | 51706.6 |
| metallophosphoesterase family protein | EHT25_07415 | Not Available | Positive | 1818570 - 1820354 | 67677.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
