Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | EHT25_06515 | Not Available | Negative | 1579318 - 1580781 | 54467.9 |
| ribose-phosphate pyrophosphokinase | EHT25_06520 | Not Available | Negative | 1580781 - 1581620 | 30370.8 |
| nudix hydrolase | EHT25_06525 | Not Available | Negative | 1581721 - 1582401 | 26266.4 |
| arac family transcriptional regulator | EHT25_06530 | Not Available | Negative | 1582419 - 1583267 | 32628.0 |
| mfs transporter | EHT25_06535 | Not Available | Positive | 1583415 - 1584608 | 40867.7 |
| glyoxalase | EHT25_06540 | Not Available | Positive | 1584605 - 1584991 | 14517.0 |
| had family phosphatase | EHT25_06545 | Not Available | Positive | 1585082 - 1585756 | 24834.6 |
| mosc domain-containing protein | EHT25_06550 | Not Available | Negative | 1585734 - 1586243 | 18453.7 |
| susc/raga family tonb-linked outer membrane protein | EHT25_06555 | Not Available | Positive | 1586576 - 1589785 | 116684.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_06560 | Not Available | Positive | 1589821 - 1591407 | 57940.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
