Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | EHT25_06465 | Not Available | Positive | 1564104 - 1564478 | 14101.2 |
| histidinol-phosphate transaminase | EHT25_06470 | Not Available | Positive | 1564491 - 1565588 | 40367.6 |
| hypothetical protein | EHT25_06475 | Not Available | Positive | 1565604 - 1566137 | 19708.5 |
| exodeoxyribonuclease v | EHT25_06480 | Not Available | Positive | 1566268 - 1569606 | 128252.0 |
| glycoside hydrolase family 127 protein | EHT25_06485 | Not Available | Positive | 1569712 - 1571667 | 72334.8 |
| arac family transcriptional regulator | EHT25_06490 | Not Available | Positive | 1571863 - 1572696 | 32168.3 |
| dihydrofolate reductase | EHT25_06495 | Not Available | Positive | 1572832 - 1573347 | 19243.0 |
| ai-2e family transporter | EHT25_06500 | Not Available | Negative | 1573403 - 1574476 | 40018.4 |
| l-serine ammonia-lyase | EHT25_06505 | Not Available | Negative | 1575552 - 1576928 | 49073.2 |
| pyrroloquinoline quinone-dependent dehydrogenase | EHT25_06510 | Not Available | Positive | 1577044 - 1579158 | 76793.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
