Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase family protein | EHT25_06415 | Not Available | Negative | 1554672 - 1555463 | 29703.0 |
| sugar phosphate isomerase/epimerase | EHT25_06420 | Not Available | Negative | 1555508 - 1556440 | 34965.3 |
| gfo/idh/moca family oxidoreductase | EHT25_06425 | Not Available | Negative | 1556428 - 1557798 | 50423.5 |
| duf1080 domain-containing protein | EHT25_06430 | Not Available | Negative | 1557795 - 1558529 | 27110.1 |
| arac family transcriptional regulator | EHT25_06435 | Not Available | Positive | 1558645 - 1559505 | 32647.2 |
| hypothetical protein | EHT25_06440 | Not Available | Positive | 1559615 - 1560370 | 28156.2 |
| glycosylasparaginase | EHT25_06445 | Not Available | Positive | 1560450 - 1561472 | 36825.1 |
| atp phosphoribosyltransferase | EHT25_06450 | Not Available | Positive | 1561613 - 1562473 | 31243.5 |
| histidinol dehydrogenase | EHT25_06455 | Not Available | Positive | 1562565 - 1563833 | 45282.5 |
| hypothetical protein | EHT25_06460 | Not Available | Positive | 1563877 - 1564107 | 8688.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
