Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3471 domain-containing protein | EHT25_06315 | Not Available | Negative | 1533385 - 1535115 | 64611.4 |
| arac family transcriptional regulator | EHT25_06320 | Not Available | Positive | 1535315 - 1536226 | 35003.8 |
| sdr family oxidoreductase | EHT25_06325 | Not Available | Positive | 1536327 - 1537091 | 26980.3 |
| hypothetical protein | EHT25_06330 | Not Available | Negative | 1537115 - 1537825 | 26837.0 |
| duf4180 domain-containing protein | EHT25_06335 | Not Available | Negative | 1537897 - 1538256 | 13516.1 |
| duf1572 domain-containing protein | EHT25_06340 | Not Available | Negative | 1538377 - 1538943 | 22331.1 |
| antibiotic biosynthesis monooxygenase | EHT25_06345 | Not Available | Negative | 1539041 - 1539322 | 10877.0 |
| rna 2'-phosphotransferase | EHT25_06350 | Not Available | Negative | 1539332 - 1539883 | 21102.2 |
| 1,4-beta-xylanase | EHT25_06355 | Not Available | Negative | 1540068 - 1541150 | 41207.1 |
| hypothetical protein | EHT25_06360 | Not Available | Negative | 1541213 - 1541503 | 10789.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
