Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | EHT25_06115 | Not Available | Negative | 1489526 - 1491202 | 58374.6 |
| fad-dependent oxidoreductase | EHT25_06120 | Not Available | Positive | 1491367 - 1493097 | 64329.6 |
| duf2236 domain-containing protein | EHT25_06125 | Not Available | Negative | 1493246 - 1494019 | 30088.9 |
| hypothetical protein | EHT25_06130 | Not Available | Negative | 1494151 - 1497297 | 108315.0 |
| dna-binding response regulator | EHT25_06135 | Not Available | Negative | 1497500 - 1498261 | 28778.2 |
| histidine kinase | EHT25_06140 | Not Available | Negative | 1498261 - 1499268 | 38774.6 |
| abc transporter atp-binding protein | EHT25_06145 | Not Available | Positive | 1499716 - 1500759 | 38824.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | EHT25_06150 | Not Available | Positive | 1500870 - 1502231 | 50620.0 |
| tolc family protein | EHT25_06155 | Not Available | Positive | 1502228 - 1503664 | 54407.6 |
| ompa family protein | EHT25_06160 | Not Available | Negative | 1503701 - 1504453 | 28610.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
