Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | EHT25_06065 | Not Available | Positive | 1479053 - 1480165 | 41980.9 |
| glycerol acyltransferase | EHT25_06070 | Not Available | Negative | 1480154 - 1480720 | 21774.5 |
| site-2 protease family protein | EHT25_06075 | Not Available | Negative | 1480755 - 1481900 | 43314.2 |
| had family phosphatase | EHT25_06080 | Not Available | Negative | 1481863 - 1482543 | 25738.6 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | EHT25_06085 | Not Available | Negative | 1482555 - 1483508 | 35877.4 |
| mbl fold metallo-hydrolase | EHT25_06090 | Not Available | Negative | 1483649 - 1485085 | 53892.4 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EHT25_06095 | Not Available | Positive | 1485330 - 1486862 | 54507.8 |
| response regulator | EHT25_06100 | Not Available | Negative | 1486867 - 1487316 | 17274.5 |
| histidine kinase | EHT25_06105 | Not Available | Negative | 1487276 - 1488766 | 56263.9 |
| atp-dependent protease subunit hslv | EHT25_06110 | Not Available | Negative | 1488884 - 1489423 | 19284.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
