Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | EHT25_05965 | Not Available | Negative | 1455380 - 1457104 | 65206.6 |
| membrane protein insertase yidc | EHT25_05970 | Not Available | Negative | 1457247 - 1459094 | 69344.0 |
| ctp synthase | EHT25_05975 | Not Available | Negative | 1459198 - 1460862 | 62107.6 |
| helix-turn-helix domain-containing protein | EHT25_05980 | Not Available | Negative | 1460989 - 1461969 | 36649.4 |
| serine hydrolase family protein | EHT25_05985 | Not Available | Positive | 1462105 - 1462716 | 22354.0 |
| voc family protein | EHT25_05990 | Not Available | Positive | 1462803 - 1463237 | 15811.8 |
| dihydrofolate reductase | EHT25_05995 | Not Available | Positive | 1463354 - 1463929 | 21407.8 |
| hypothetical protein | EHT25_06000 | Not Available | Positive | 1463976 - 1464212 | 8938.58 |
| pyrroloquinoline quinone-dependent dehydrogenase | EHT25_06005 | Not Available | Positive | 1464270 - 1466438 | 79241.6 |
| amino acid abc transporter substrate-binding protein | EHT25_06010 | Not Available | Negative | 1466479 - 1467690 | 41920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
