Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | EHT25_05815 | Not Available | Positive | 1420717 - 1421301 | 21569.9 |
| nudix domain-containing protein | EHT25_05820 | Not Available | Negative | 1421298 - 1421855 | 21129.9 |
| atp-dependent clp protease proteolytic subunit | EHT25_05825 | Not Available | Negative | 1422026 - 1422703 | 25382.5 |
| hypothetical protein | EHT25_05830 | Not Available | Negative | 1422814 - 1423032 | 8531.26 |
| sigma-70 family rna polymerase sigma factor | EHT25_05835 | Not Available | Negative | 1423038 - 1423592 | 21457.7 |
| Trna-ala | Not Available | Not Available | Positive | 1423711 - 1423787 | Not Available |
| duf3299 domain-containing protein | EHT25_05845 | Not Available | Negative | 1423857 - 1424342 | 17767.5 |
| sensor histidine kinase | EHT25_05850 | Not Available | Positive | 1424520 - 1426040 | 57935.9 |
| dna-binding response regulator | EHT25_05855 | Not Available | Positive | 1426030 - 1426665 | 23949.2 |
| peroxiredoxin | EHT25_05860 | Not Available | Positive | 1426793 - 1427428 | 23444.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
