Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | EHT25_05560 | Not Available | Negative | 1360782 - 1362023 | 45685.4 |
| ftsx-like permease family protein | EHT25_05565 | Not Available | Negative | 1362216 - 1364669 | 91319.1 |
| sigma-70 family rna polymerase sigma factor | EHT25_05570 | Not Available | Positive | 1365208 - 1365807 | 23751.6 |
| class c beta-lactamase-related serine hydrolase | EHT25_05575 | Not Available | Positive | 1365868 - 1367025 | 43635.8 |
| dinb family protein | EHT25_05580 | Not Available | Positive | 1367071 - 1367592 | 19458.2 |
| duf4974 domain-containing protein | EHT25_05585 | Not Available | Positive | 1367728 - 1368756 | 38953.2 |
| tonb-dependent receptor | EHT25_05590 | Not Available | Positive | 1368799 - 1372248 | 125779.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_05595 | Not Available | Positive | 1372263 - 1373930 | 61894.1 |
| arylsulfatase | EHT25_05600 | Not Available | Positive | 1374053 - 1375561 | 54579.1 |
| sulfatase | EHT25_05605 | Not Available | Positive | 1375572 - 1376957 | 52206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
