Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT25_05510 | Not Available | Negative | 1345606 - 1348614 | 108453.0 |
| fecr family protein | EHT25_05515 | Not Available | Negative | 1349291 - 1350400 | 41677.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | EHT25_05520 | Not Available | Positive | 1350594 - 1351136 | 19738.8 |
| gmc family oxidoreductase | EHT25_05525 | Not Available | Positive | 1351280 - 1352983 | 63494.2 |
| dienelactone hydrolase family protein | EHT25_05530 | Not Available | Negative | 1353094 - 1353951 | 31367.6 |
| nudix domain-containing protein | EHT25_05535 | Not Available | Negative | 1354105 - 1354797 | 26994.2 |
| sodium transporter | EHT25_05540 | Not Available | Negative | 1354887 - 1356542 | 60431.9 |
| l-ribulose-5-phosphate 4-epimerase | EHT25_05545 | Not Available | Negative | 1356618 - 1357322 | 26138.1 |
| ribulokinase | EHT25_05550 | Not Available | Negative | 1357336 - 1358976 | 59213.5 |
| l-arabinose isomerase | EHT25_05555 | Not Available | Negative | 1359063 - 1360559 | 55773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
