Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_05305 | Not Available | Positive | 1283033 - 1283557 | 18393.9 |
| gliding motility-associated c-terminal domain-containing protein | EHT25_05310 | Not Available | Negative | 1283635 - 1286001 | 85410.7 |
| chbg/hpnk family deacetylase | EHT25_05315 | Not Available | Negative | 1286417 - 1287280 | 32578.6 |
| duf4412 domain-containing protein | EHT25_05325 | Not Available | Positive | 1288568 - 1289365 | 29512.9 |
| ngg1p interacting factor nif3 | EHT25_05330 | Not Available | Positive | 1289362 - 1290270 | 33786.1 |
| tonb-dependent receptor | EHT25_05335 | Not Available | Positive | 1291026 - 1294022 | 108572.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_05340 | Not Available | Positive | 1294147 - 1295769 | 59936.2 |
| hypothetical protein | EHT25_05345 | Not Available | Negative | 1295860 - 1296153 | 11401.5 |
| m4 family peptidase | EHT25_05350 | Not Available | Negative | 1296180 - 1297211 | 37671.7 |
| sialate o-acetylesterase | EHT25_05355 | Not Available | Negative | 1297439 - 1298839 | 51726.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
