Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | EHT25_05155 | Not Available | Negative | 1243073 - 1243522 | 15984.9 |
| proline--trna ligase | EHT25_05160 | Not Available | Negative | 1243695 - 1245167 | 55785.4 |
| hypothetical protein | EHT25_05165 | Not Available | Positive | 1245359 - 1246651 | 46385.4 |
| hypothetical protein | EHT25_05170 | Not Available | Positive | 1246882 - 1248426 | 56131.7 |
| sigma-70 family rna polymerase sigma factor | EHT25_05175 | Not Available | Positive | 1248630 - 1249232 | 23022.7 |
| multidrug efflux rnd transporter permease subunit | EHT25_05180 | Not Available | Negative | 1249236 - 1252430 | 116187.0 |
| efflux rnd transporter periplasmic adaptor subunit | EHT25_05185 | Not Available | Negative | 1252443 - 1253609 | 41803.0 |
| tolc family protein | EHT25_05190 | Not Available | Negative | 1253650 - 1255002 | 51179.1 |
| shikimate kinase | EHT25_05195 | Not Available | Negative | 1255124 - 1255633 | 19457.4 |
| doxx family protein | EHT25_05200 | Not Available | Negative | 1255659 - 1256807 | 43050.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
