Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT87_04870 | Not Available | Positive | 1195802 - 1196233 | 15380.5 |
| jab domain-containing protein | EHT87_04875 | Not Available | Negative | 1196308 - 1197003 | 25600.0 |
| 30s ribosomal protein s20 | EHT87_04880 | Not Available | Negative | 1197130 - 1197393 | 9807.22 |
| dabb family protein | EHT87_04885 | Not Available | Negative | 1197489 - 1197890 | 15532.6 |
| class i sam-dependent rrna methyltransferase | EHT87_04895 | Not Available | Positive | 1199031 - 1200218 | 44082.6 |
| vcbs repeat-containing protein | EHT87_04900 | Not Available | Positive | 1200249 - 1201382 | 41995.1 |
| vcbs repeat-containing protein | EHT87_04905 | Not Available | Positive | 1201453 - 1202685 | 45825.8 |
| pdz domain-containing protein | EHT87_04910 | Not Available | Negative | 1202758 - 1203780 | 35877.8 |
| udp-galactopyranose mutase | EHT87_04915 | Not Available | Positive | 1204168 - 1205310 | 43812.5 |
| hypothetical protein | EHT87_04920 | Not Available | Positive | 1205486 - 1207009 | 57007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
