Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | EHT87_04820 | Not Available | Positive | 1183060 - 1184196 | 43346.7 |
| hypothetical protein | EHT87_04825 | Not Available | Positive | 1184532 - 1185731 | 46686.7 |
| uracil-dna glycosylase | EHT87_04830 | Not Available | Negative | 1185765 - 1186430 | 24929.8 |
| co2+/mg2+ efflux protein apag | EHT87_04835 | Not Available | Positive | 1186600 - 1186986 | 14422.2 |
| class i sam-dependent methyltransferase | EHT87_04840 | Not Available | Positive | 1187025 - 1187798 | 29649.6 |
| hypothetical protein | EHT87_04845 | Not Available | Positive | 1187876 - 1189255 | 50811.7 |
| dead/deah box helicase | EHT87_04850 | Not Available | Negative | 1189382 - 1191277 | 70866.8 |
| anthranilate synthase component i family protein | EHT87_04855 | Not Available | Negative | 1191673 - 1193016 | 50823.6 |
| nyn domain-containing protein | EHT87_04860 | Not Available | Negative | 1193016 - 1193975 | 36815.3 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | EHT87_04865 | Not Available | Positive | 1194219 - 1195343 | 42307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
