Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-disulfide reductase | EHT87_04720 | Not Available | Positive | 1162190 - 1163143 | 34058.7 |
| lysm peptidoglycan-binding domain-containing protein | EHT87_04725 | Not Available | Positive | 1163301 - 1164374 | 40369.4 |
| bacillithiol biosynthesis deacetylase bshb1 | EHT87_04730 | Not Available | Positive | 1164389 - 1165123 | 27518.8 |
| pyridoxamine 5'-phosphate oxidase | EHT87_04735 | Not Available | Negative | 1165212 - 1165853 | 24455.8 |
| duf349 domain-containing protein | EHT87_04740 | Not Available | Positive | 1165950 - 1168154 | 83710.2 |
| Trna-thr | Not Available | Not Available | Positive | 1168306 - 1168378 | Not Available |
| hypothetical protein | EHT87_04750 | Not Available | Positive | 1168481 - 1169275 | 30442.6 |
| alpha/beta hydrolase | EHT87_04755 | Not Available | Positive | 1169586 - 1170548 | 34743.9 |
| sorbosone dehydrogenase family protein | EHT87_04760 | Not Available | Positive | 1170723 - 1171943 | 44248.3 |
| alanine dehydrogenase | EHT87_04765 | Not Available | Negative | 1172096 - 1173235 | 41296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
