Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3822 family protein | EHT87_04620 | Not Available | Negative | 1139154 - 1140026 | 33275.5 |
| nudix hydrolase | EHT87_04625 | Not Available | Negative | 1140150 - 1140638 | 18842.8 |
| cbs domain-containing protein | EHT87_04630 | Not Available | Negative | 1140768 - 1141205 | 15993.4 |
| hypothetical protein | EHT87_04635 | Not Available | Positive | 1141396 - 1141785 | 14565.5 |
| atp-dependent endonuclease | EHT87_04640 | Not Available | Positive | 1141828 - 1143252 | 54626.4 |
| hypothetical protein | EHT87_04645 | Not Available | Positive | 1143257 - 1143550 | 11170.8 |
| degt/dnrj/eryc1/strs family aminotransferase | EHT87_04650 | Not Available | Positive | 1143769 - 1145184 | 51733.5 |
| helix-turn-helix domain-containing protein | EHT87_04655 | Not Available | Positive | 1145576 - 1146445 | 34266.6 |
| hypothetical protein | EHT87_04660 | Not Available | Positive | 1146775 - 1149144 | 86578.8 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | EHT87_04665 | Not Available | Positive | 1149446 - 1151074 | 60534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
