Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine aminopropyltransferase | EHT87_04520 | Not Available | Negative | 1116402 - 1117925 | 57285.0 |
| duf350 domain-containing protein | EHT87_04525 | Not Available | Negative | 1117918 - 1118133 | 7787.85 |
| hypothetical protein | EHT87_04530 | Not Available | Negative | 1118145 - 1118339 | 7268.64 |
| duf4178 domain-containing protein | EHT87_04535 | Not Available | Negative | 1118358 - 1119626 | 48087.9 |
| s-adenosylmethionine decarboxylase | EHT87_04540 | Not Available | Negative | 1119641 - 1119997 | 13359.9 |
| hypothetical protein | EHT87_04545 | Not Available | Negative | 1120016 - 1121713 | 63401.7 |
| hypothetical protein | EHT87_04550 | Not Available | Positive | 1121899 - 1122171 | 10102.9 |
| alanine--trna ligase | EHT87_04555 | Not Available | Negative | 1122243 - 1124900 | 98558.2 |
| merr family transcriptional regulator | EHT87_04560 | Not Available | Positive | 1125007 - 1125336 | 13060.9 |
| hypothetical protein | EHT87_04565 | Not Available | Negative | 1125442 - 1126950 | 56514.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
