Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EHT87_04470 | Not Available | Positive | 1101167 - 1104301 | 114226.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT87_04475 | Not Available | Positive | 1104380 - 1105927 | 57214.0 |
| galactonate dehydratase | EHT87_04480 | Not Available | Positive | 1106056 - 1107291 | 45058.7 |
| 2-keto-3-deoxy-galactonokinase | EHT87_04485 | Not Available | Positive | 1107402 - 1108400 | 37172.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EHT87_04490 | Not Available | Positive | 1108412 - 1109056 | 22934.9 |
| mfs transporter | EHT87_04495 | Not Available | Positive | 1109105 - 1110406 | 48376.8 |
| arylsulfatase | EHT87_04500 | Not Available | Positive | 1110421 - 1111881 | 53545.1 |
| response regulator | EHT87_04505 | Not Available | Negative | 1111946 - 1113694 | 65532.5 |
| nuclear transport factor 2 family protein | EHT87_04510 | Not Available | Negative | 1114246 - 1114713 | 17760.4 |
| nad(p)/fad-dependent oxidoreductase | EHT87_04515 | Not Available | Negative | 1114772 - 1116427 | 60910.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
