Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | EHT87_04370 | Not Available | Positive | 1078820 - 1079812 | 36547.6 |
| cupin domain-containing protein | EHT87_04375 | Not Available | Negative | 1079834 - 1080385 | 20793.1 |
| thua domain-containing protein | EHT87_04380 | Not Available | Negative | 1080480 - 1081310 | 31746.5 |
| class a beta-lactamase-related serine hydrolase | EHT87_04385 | Not Available | Negative | 1081350 - 1082957 | 59321.2 |
| radical sam protein | EHT87_04390 | Not Available | Positive | 1083056 - 1085254 | 82460.8 |
| duf2132 domain-containing protein | EHT87_04395 | Not Available | Positive | 1085620 - 1085841 | 8540.33 |
| glycosylase | EHT87_04400 | Not Available | Positive | 1086021 - 1086935 | 35367.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | EHT87_04405 | Not Available | Positive | 1087057 - 1087965 | 34256.6 |
| mfs transporter | EHT87_04410 | Not Available | Negative | 1087968 - 1089143 | 42005.5 |
| hypothetical protein | EHT87_04415 | Not Available | Negative | 1089255 - 1089632 | 13786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
