Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | EHT87_04320 | Not Available | Positive | 1069613 - 1070383 | 26940.6 |
| 16s rrna processing protein rimm | EHT87_04325 | Not Available | Positive | 1070506 - 1071096 | 22238.4 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EHT87_04330 | Not Available | Positive | 1071086 - 1071760 | 25329.3 |
| penicillin-binding protein | EHT87_04335 | Not Available | Negative | 1071784 - 1073976 | 82158.0 |
| gnat family n-acetyltransferase | EHT87_04340 | Not Available | Negative | 1074041 - 1074490 | 17400.8 |
| rlua family pseudouridine synthase | EHT87_04345 | Not Available | Negative | 1074574 - 1075614 | 39441.9 |
| hypothetical protein | EHT87_04350 | Not Available | Positive | 1075818 - 1076207 | 14269.0 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | EHT87_04355 | Not Available | Positive | 1076243 - 1077097 | 31531.0 |
| formyl transferase | EHT87_04360 | Not Available | Positive | 1077158 - 1077922 | 29022.4 |
| duf3473 domain-containing protein | EHT87_04365 | Not Available | Positive | 1077926 - 1078786 | 33649.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
