Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | EHT87_04270 | Not Available | Negative | 1057446 - 1058435 | 37065.8 |
| hypothetical protein | EHT87_04275 | Not Available | Positive | 1058611 - 1059747 | 40896.5 |
| glycerophosphodiester phosphodiesterase | EHT87_04280 | Not Available | Negative | 1059819 - 1060592 | 29199.8 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | EHT87_04285 | Not Available | Positive | 1060730 - 1061476 | 26401.9 |
| vwa domain-containing protein | EHT87_04290 | Not Available | Positive | 1061561 - 1063645 | 77900.4 |
| duf2279 domain-containing protein | EHT87_04295 | Not Available | Positive | 1063632 - 1064582 | 36388.6 |
| dna mismatch repair protein muts | EHT87_04300 | Not Available | Positive | 1064678 - 1065691 | 37624.2 |
| duf4403 family protein | EHT87_04305 | Not Available | Positive | 1065639 - 1067108 | 55490.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1067234 - 1067687 | Not Available |
| ompa family protein | EHT87_04315 | Not Available | Positive | 1067934 - 1069343 | 52293.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
