Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | EHT87_04070 | Not Available | Negative | 1008472 - 1009605 | 44169.4 |
| tonb-dependent receptor | EHT87_04075 | Not Available | Positive | 1009979 - 1012330 | 87054.3 |
| m42 family peptidase | EHT87_04080 | Not Available | Positive | 1012422 - 1013507 | 39907.5 |
| hypothetical protein | EHT87_04085 | Not Available | Positive | 1013638 - 1014264 | 23914.8 |
| duf1501 domain-containing protein | EHT87_04090 | Not Available | Negative | 1014261 - 1015694 | 53796.3 |
| duf1553 domain-containing protein | EHT87_04095 | Not Available | Negative | 1015697 - 1019041 | 125480.0 |
| tonb-dependent receptor | EHT87_04100 | Not Available | Negative | 1019309 - 1022185 | 107165.0 |
| glpgli family protein | EHT87_04105 | Not Available | Negative | 1022361 - 1023194 | 30977.9 |
| helix-turn-helix domain-containing protein | EHT87_04110 | Not Available | Positive | 1023327 - 1024184 | 32657.3 |
| aldo/keto reductase | EHT87_04115 | Not Available | Positive | 1024249 - 1025241 | 36179.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
