Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EHT87_00345 | Not Available | Positive | 90751 - 91917 | 42911.5 |
| yicc family protein | EHT87_00350 | Not Available | Positive | 91924 - 92814 | 33723.6 |
| l-lysine dehydrogenase | EHT87_00355 | Not Available | Negative | 92914 - 93966 | 38429.6 |
| dna-3-methyladenine glycosylase | EHT87_00360 | Not Available | Positive | 94032 - 94619 | 21523.1 |
| coce/nond family hydrolase | EHT87_00365 | Not Available | Negative | 94623 - 96545 | 73430.6 |
| tonb-dependent receptor | EHT87_00370 | Not Available | Positive | 96670 - 99048 | 88258.4 |
| pepsy domain-containing protein | EHT87_00375 | Not Available | Positive | 99061 - 100221 | 43961.4 |
| hypothetical protein | EHT87_00380 | Not Available | Negative | 100349 - 101968 | 58366.3 |
| hypothetical protein | EHT87_00385 | Not Available | Negative | 102032 - 102706 | 24481.7 |
| aldehyde dehydrogenase family protein | EHT87_00390 | Not Available | Positive | 102954 - 104486 | 55717.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
