Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | EHT87_03870 | Not Available | Negative | 958048 - 958923 | 32528.3 |
| rna polymerase sigma factor | EHT87_03875 | Not Available | Negative | 958920 - 959468 | 21065.2 |
| hypothetical protein | EHT87_03880 | Not Available | Negative | 959624 - 959914 | 10431.4 |
| diaminopimelate decarboxylase | EHT87_03885 | Not Available | Positive | 960114 - 961370 | 46653.9 |
| yebc/pmpr family dna-binding transcriptional regulator | EHT87_03890 | Not Available | Positive | 961449 - 962162 | 26815.8 |
| hypothetical protein | EHT87_03895 | Not Available | Negative | 962177 - 962434 | 10039.8 |
| gliding motility-associated c-terminal domain-containing protein | EHT87_03900 | Not Available | Negative | 962528 - 965434 | 105525.0 |
| glycosyltransferase | EHT87_03905 | Not Available | Negative | 965650 - 966636 | 38026.0 |
| sugar transferase | EHT87_03910 | Not Available | Positive | 967486 - 968145 | 25345.2 |
| polysaccharide biosynthesis tyrosine autokinase | EHT87_03915 | Not Available | Positive | 968255 - 970552 | 86026.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
