Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | EHT87_03670 | Not Available | Negative | 920219 - 920983 | 29848.1 |
| hypothetical protein | EHT87_03675 | Not Available | Positive | 921134 - 921472 | 12872.3 |
| histidine--trna ligase | EHT87_03680 | Not Available | Positive | 921847 - 923214 | 50598.9 |
| port family protein | EHT87_03685 | Not Available | Negative | 923295 - 924131 | 29523.9 |
| glucose-6-phosphate isomerase | EHT87_03690 | Not Available | Negative | 924212 - 925882 | 62791.7 |
| glycoside hydrolase | EHT87_03695 | Not Available | Negative | 925894 - 926634 | 28831.6 |
| hypothetical protein | EHT87_03700 | Not Available | Negative | 926808 - 927080 | 9974.99 |
| peroxiredoxin | EHT87_03705 | Not Available | Negative | 927404 - 928039 | 23577.0 |
| dna-binding response regulator | EHT87_03710 | Not Available | Negative | 928177 - 928812 | 23935.2 |
| sensor histidine kinase | EHT87_03715 | Not Available | Negative | 928802 - 930316 | 57919.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
