Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EHT87_03520 | Not Available | Positive | 886082 - 886537 | 17522.9 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EHT87_03525 | Not Available | Negative | 886548 - 888149 | 56790.5 |
| mbl fold metallo-hydrolase | EHT87_03530 | Not Available | Positive | 888341 - 889777 | 53684.4 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | EHT87_03535 | Not Available | Positive | 889918 - 890871 | 35774.3 |
| had family phosphatase | EHT87_03540 | Not Available | Positive | 890883 - 891563 | 25633.4 |
| site-2 protease family protein | EHT87_03545 | Not Available | Positive | 891526 - 892671 | 43396.3 |
| glycerol acyltransferase | EHT87_03550 | Not Available | Positive | 892709 - 893275 | 21687.5 |
| lipid-a-disaccharide synthase | EHT87_03555 | Not Available | Negative | 893268 - 894410 | 42913.0 |
| 6-carboxytetrahydropterin synthase | EHT87_03560 | Not Available | Negative | 894414 - 894830 | 16076.3 |
| adp-glyceromanno-heptose 6-epimerase | EHT87_03565 | Not Available | Positive | 895147 - 896112 | 37377.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
