Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rraa family protein | EHT87_30955 | Not Available | Negative | 7607651 - 7608583 | 34447.7 |
| rraa family protein | EHT87_30960 | Not Available | Negative | 7608596 - 7609528 | 34251.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | EHT87_30965 | Not Available | Positive | 7609817 - 7611289 | 54362.2 |
| transposase | EHT87_30970 | Not Available | Negative | 7611527 - 7611670 | 5581.65 |
| hypothetical protein | EHT87_30975 | Not Available | Negative | 7611944 - 7612153 | 8522.4 |
| tetr/acrr family transcriptional regulator | EHT87_30980 | Not Available | Positive | 7612360 - 7612938 | 22247.8 |
| sdr family oxidoreductase | EHT87_30985 | Not Available | Positive | 7613073 - 7613867 | 27349.8 |
| hypothetical protein | EHT87_30990 | Not Available | Negative | 7614000 - 7614404 | 14363.5 |
| recombinase family protein | EHT87_30995 | Not Available | Positive | 7614835 - 7615491 | 24515.8 |
| cupin domain-containing protein | EHT87_31000 | Not Available | Positive | 7615945 - 7616484 | 20610.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
