Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EHT87_30545 | Not Available | Negative | 7507604 - 7509991 | 87914.0 |
| ld-carboxypeptidase | EHT87_30550 | Not Available | Negative | 7510158 - 7511180 | 36843.9 |
| glucosamine-6-phosphate deaminase | EHT87_30555 | Not Available | Positive | 7511366 - 7513324 | 73210.1 |
| duf1624 domain-containing protein | EHT87_30560 | Not Available | Positive | 7513591 - 7514742 | 42607.6 |
| insulinase family protein | EHT87_30565 | Not Available | Positive | 7514809 - 7517676 | 107136.0 |
| helix-turn-helix domain-containing protein | EHT87_30570 | Not Available | Positive | 7517756 - 7518574 | 31143.2 |
| nuclear transport factor 2 family protein | EHT87_30575 | Not Available | Positive | 7518671 - 7519111 | 16342.2 |
| hypothetical protein | EHT87_30580 | Not Available | Negative | 7519221 - 7520705 | 55981.7 |
| hypothetical protein | EHT87_30585 | Not Available | Negative | 7520721 - 7522583 | 70073.1 |
| cpbp family intramembrane metalloprotease | EHT87_30590 | Not Available | Negative | 7522996 - 7524177 | 44016.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
