Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella knui |
| Strain | KCTC42998 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1854750 bp
Thymine Count
1865285 bp
Guanine Count
1965966 bp
Cytosine Count
1966621 bp
Genome Length
7653530 bp
Protein-coding Genes
6118 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EHT87_30445 | Not Available | Positive | 7469391 - 7471112 | 64364.7 |
| glycosyl hydrolase family protein | EHT87_30450 | Not Available | Positive | 7471106 - 7471912 | 30336.0 |
| hypothetical protein | EHT87_30455 | Not Available | Positive | 7472052 - 7472453 | 14357.4 |
| hypothetical protein | EHT87_30460 | Not Available | Negative | 7472477 - 7472692 | 7703.74 |
| duf1501 domain-containing protein | EHT87_30465 | Not Available | Negative | 7472930 - 7474441 | 55641.3 |
| duf1553 domain-containing protein | EHT87_30470 | Not Available | Negative | 7474443 - 7477214 | 104521.0 |
| rna-binding protein | EHT87_30475 | Not Available | Negative | 7477321 - 7480629 | 122164.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT87_30480 | Not Available | Negative | 7480711 - 7482279 | 58043.1 |
| tonb-dependent receptor | EHT87_30485 | Not Available | Negative | 7482311 - 7485370 | 111719.0 |
| mfs transporter | EHT87_30490 | Not Available | Negative | 7485546 - 7486886 | 48163.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
